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Nornir takes overlapping microscope images and produces aligned 2D mosaics and 3D volumes. Pick the path that matches what you are doing.

New users

• Host requirements — whether this machine can run Pyre, a pipeline, or Docker.

• Overview — what Nornir is, and where Viking and SBFSEM-tools fit.

• Overview of volume building — how a volume is built, with figures.

• Installing Pyre on Windows — Windows installer for the interactive tool.

• Using Pyre — mouse, keyboard, and registration controls.

• Build a volume — import through CreateVikingXML, then Viking and SBFSEM-tools.

Agents and contributors

• Agents and contributors — monorepo layout, installs, tests, and logging.

• Logging convention — session log files and worker processes.

• Cursor / local agent dev shell — Dev Container shell.

Performance

• Performance — production hardware, pools, GPU, and profiling.

Reference

• Packages — package overviews.

• Pipeline catalogue — nornir-build stages grouped by job.

• API reference — generated API pages.

• Development — release, publishing, and audits.